Comments on: Standalone BLAST with Ruby revisited http://biorelated.com/2009/12/15/standalone-blast-with-ruby-revisited/ Sat, 28 Apr 2012 00:12:27 +0000 hourly 1 http://wordpress.com/ By: biorelated http://biorelated.com/2009/12/15/standalone-blast-with-ruby-revisited/#comment-192 Wed, 02 Feb 2011 11:49:03 +0000 http://biorelated.wordpress.com/?p=211#comment-192 Hi,
Sorry for the late reply. I have not yet looked at BLAST++. Might write another post on working with BLAST++. Not so sure about whether the bioruby community has started support for the new version of BLAST.
Thanks

]]> By: Craig Knox http://biorelated.com/2009/12/15/standalone-blast-with-ruby-revisited/#comment-189 Fri, 28 Jan 2011 21:17:02 +0000 http://biorelated.wordpress.com/?p=211#comment-189 Hi there, great post. Any thoughts on upgrading to BLAST+? Have you successfully used BioRuby with BLAST+ (using the legacy perl wrapper maybe)? I haven’t been successful to date.

]]> By: biorelated http://biorelated.com/2009/12/15/standalone-blast-with-ruby-revisited/#comment-156 Tue, 02 Feb 2010 16:36:09 +0000 http://biorelated.wordpress.com/?p=211#comment-156 Thank you for the suggestion. Will look at it.

]]> By: Anonymous http://biorelated.com/2009/12/15/standalone-blast-with-ruby-revisited/#comment-155 Tue, 02 Feb 2010 14:32:32 +0000 http://biorelated.wordpress.com/?p=211#comment-155 Thank you for the informative post.
Could you also give an example of how to.use ruby to make an informative image from a blast result?

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