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	<title>Biorelated &#187; laboratory</title>
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		<title>Biorelated &#187; laboratory</title>
		<link>http://biorelated.com</link>
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		<title>PC vs Apple Mac (Not the war!)</title>
		<link>http://biorelated.com/2009/12/09/pc-vs-apple-mac-not-the-war/</link>
		<comments>http://biorelated.com/2009/12/09/pc-vs-apple-mac-not-the-war/#comments</comments>
		<pubDate>Wed, 09 Dec 2009 13:45:58 +0000</pubDate>
		<dc:creator>biorelated</dc:creator>
				<category><![CDATA[bioinformatics]]></category>
		<category><![CDATA[laboratory]]></category>
		<category><![CDATA[technology]]></category>
		<category><![CDATA[Mac]]></category>
		<category><![CDATA[PC]]></category>

		<guid isPermaLink="false">http://biorelated.wordpress.com/?p=184</guid>
		<description><![CDATA[My good old PC running Linux OS is coming of age and recently started failing. The Optical drive is not functional and occasionally it will freeze. The Top cover does not hold anymore and the graphical TFT screen needs to be supported carefully. While this particular computer has served me well, I am at that [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=biorelated.com&amp;blog=1167040&amp;post=184&amp;subd=biorelated&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>My good old PC running Linux OS is coming of age and recently started failing. The Optical drive is not functional and occasionally it will freeze. The Top cover does not hold anymore and the graphical TFT screen needs to be supported carefully.</p>
<p>While this particular computer has served me well, I am at that point where i need a new machine but am torn between an Apple Mac and a PC running Linux. First my work involves the following aspects;</p>
<ol>
<li>Compiling and running bioinformatics software developed using open source standards and technologies</li>
<li>Programming</li>
<li> Word processing and document editing</li>
<li>Occasional mathematical modeling</li>
<li>Administering  Unix based servers</li>
</ol>
<p>I have tried to come up with a computer-model agnostic specifications for my needs.</p>
<p><strong>Hardware</strong></p>
<p>* High Processor speed (2.60GHZ or above)</p>
<p>* High Memory (4GB or above)</p>
<p>* Medium Hard-disk space (160GB and above)</p>
<p>* Long Battery life ( 5hours and above)</p>
<p>* Durable external cover</p>
<p>* Ergonomic keys and mouse</p>
<p>* Support for multiple external devices(printers,Cameras,Microphones,Storage devices,monitors)</p>
<p>* Excellent support for wireless technologies</p>
<p>* Support for running multiple operating systems on the same machine</p>
<p><strong>Size and weight</strong></p>
<p>* Lightweight</p>
<p>* convenience while travelling while traveling</p>
<p><strong> Operating System</strong></p>
<p>* A Unix or Linux derived operating system</p>
<p>* Easy to upgrade at zero or minimal cost</p>
<p>* Free patches against known security holes and problems.</p>
<p><strong> Software</strong></p>
<p>* Support for Open software standards</p>
<p>* Support for Microsoft, Adobe and other proprietary software vendor&#8217;s products</p>
<p><strong>Security</strong></p>
<p>* Excellent inbuilt support against Malware, Trojans and viruses at minimal or no cost</p>
<p>* Support for locking the machine while away or against unauthorized login</p>
<p>* Ability to easily &#8216;tag&#8217; the machine in case of theft</p>
<p><strong>Price :</strong> Affordable and reasonable</p>
<p>Based on the above specifications I have evaluated two computers models that can satisfy the above needs.</p>
<p>1. A PC laptop computer running a Linux based operating system</p>
<p>2. An Apple Macintosh laptop computer</p>
<p>I have ruled out a Windows/DOS based Operating software because  Microsoft Windows based operating system cannot  offer  support for open source standards and technologies. OS upgrade for windows is very expensive and the OS is highly prone to malware, Trojans and viruses. Most bioinformatics software and tools are developed on Unix or  Linux environment.</p>
<p>PC can support Linux installations even though one looses on hardware optimization. Linux has a relatively poor graphical user interface and functionality when compared to Mac OS or Windows. There is limited support for document processing, graphics and rich multimedia applications support. Linux does not support any of the Microsoft software applications natively. There are open source equivalents but most lack good support.</p>
<p>Apple Macintosh computers are based on Unix and open source technologies, they support both closed source and open source standards. The hardware is optimized and accelerated for the Apple mac OS. They offer excellent graphical user interface system, a powerful terminal for interaction with the OS, they are not prone to virus attacks, and they support long battery life as well as portability, ergonomics and a relatively within a  price range equivalent to a PC of the same specifications.</p>
<p>Given my budget constrains, I am thinking that a 2.53GHz Apple Macintosh 13 inch model with 4GB of memory is best for my needs. There is little price differences between the PC and Macintosh models based on my specifications. PC models do not favor Linux installations and Linux hardware support is not guaranteed. They however seem to have a more flexible price ranges depending on the manufacturers, vendors, quality and specifications.</p>
<p>I will keep Linux  to run my server applications.</p>
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			<media:title type="html">george_g</media:title>
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		<item>
		<title>At the Bench Series</title>
		<link>http://biorelated.com/2008/10/12/at-the-bench-series/</link>
		<comments>http://biorelated.com/2008/10/12/at-the-bench-series/#comments</comments>
		<pubDate>Sun, 12 Oct 2008 09:26:43 +0000</pubDate>
		<dc:creator>biorelated</dc:creator>
				<category><![CDATA[laboratory]]></category>
		<category><![CDATA[technology]]></category>
		<category><![CDATA[lab survival]]></category>
		<category><![CDATA[skills]]></category>

		<guid isPermaLink="false">http://biorelated.wordpress.com/?p=32</guid>
		<description><![CDATA[Am cross cutting between the bench and the computer. My mentor and supervisor has given me an excellent book called At the Bench: A  laboratory Navigator by Kathy Barker. It is an exciting read for anyone who plans to use a biomedical research laboratory and I thought, Why not share some of the gems as  [...]<img alt="" border="0" src="http://stats.wordpress.com/b.gif?host=biorelated.com&amp;blog=1167040&amp;post=32&amp;subd=biorelated&amp;ref=&amp;feed=1" width="1" height="1" />]]></description>
			<content:encoded><![CDATA[<p>Am cross cutting between the bench and the computer. My mentor and supervisor has given me an excellent book called <a title="A  laboratory Navigator by Kathy Barker" href="http://www.amazon.com/Bench-Laboratory-Navigator-Kathy-Barker/dp/0879697083" target="_blank">At the Bench: A  laboratory Navigator by Kathy Barker</a>. It is an exciting read for anyone who plans to use a biomedical research laboratory and I thought, Why not share some of the gems as  I read along:</p>
<p style="text-align:center;"><strong>Basic Survival</strong></p>
<p style="text-align:left;">Simple lab courtesy is a nice way of maintaining healthy working relationship with your fellow lab rats, in this rat race! What Kathy says sounds real trouble but i think and you will probably agree, its basic common sense.</p>
<p><strong>Attitude</strong></p>
<ul>
<li>Ask, do not command.</li>
<li>Assume nothing</li>
<li>Write down everything when given instructions</li>
<li>Make appointments or request time with people</li>
<li>Do not remove journals from the Departmental library</li>
<li>Do not discuss a fellow lab rat&#8217;s  results with people not in the lab</li>
</ul>
<p>Courtesy at the Bench</p>
<ul>
<li>Never use reagents or buffers without permission</li>
<li>Do not ignore broken equipments</li>
<li>Order common reagents if they are running low</li>
<li>Do not move things around or change locations of any tubes reagents or equipment.(This is not ya damn bedroom!)</li>
<li>Do not leave anything anywhere</li>
<li>If you do something wrong, confess (I wonder whether there is purgatory :))</li>
<li>Clean up immediately after an experiment</li>
<li>Request the minimum of favors( fellow lab rats are not working for you)</li>
</ul>
<p>Like all complex organizations, each research lab has its own culture and rules. the rules are largely unspoken and may not be written down. You are expected to know how to work with the equipment or referred to the manual.  You are required to decipher the vague signs and complex language to understand the rhythm and beat of the lab.  Kathy does a great job in  introducing the naive to the workbench  in this book.</p>
<p>All the best dear friend.</p>
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